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Article Dans Une Revue Nature Methods Année : 2017

EV-TRACK: transparent reporting and centralizing knowledge in extracellular vesicle research

Jan van Deun (1) , Pieter Mestdagh (2) , Patrizia Agostinis (3) , Ozden Akay (4, 5) , Sushma Anand (6) , Jasper Anckaert (2) , Zoraida Andreu Martinez (7) , Tine Baetens (1) , Els Beghein (8) , Laurence Bertier (7) , Geert Berx (4, 5) , Janneke Boere (9) , Stephanie Boukouris (6) , Michel Bremer (10) , Dominik Buschmann (11) , James B. Byrd (12) , Clara Casert (1) , Lesley Cheng (6) , Anna Cmoch (13) , Delphine Daveloose (1) , Eva de Smedt (4, 5) , Seyma Demirsoy (3) , Victoria Depoorter (1) , Bert Dhondt (1) , Tom A. P. Driedonks (7) , Aleksandra Dudek (3) , Abdou Elsharawy (14, 15) , Ilaria Floris (16, 17) , Andrew D. Foers (18, 19) , Kathrin Gartner (20, 21) , Abhishek D. Garg (3) , Edward Geeurickx (1) , Jan Gettemans (7) , Farzaneh Ghazavi (2) , Bernd Giebel (10) , Tom Groot Kormelink (7) , Grace Hancock (22) , Hetty Helsmoortel (2) , Andrew F. Hill (6) , Vincent Hyenne (23, 24, 25) , Hina Kalra (6) , David Kim (26) , Joanna Kowal (27, 28, 29) , Sandra Kraemer (30) , Petra Leidinger (31) , Carina Leonelli (2) , Yaxuan Liang (26) , Lien Lippens (1) , Shu Liu (32) , Alessandra Lo Cicero (33, 34, 28) , Shaun Martin (3) , Suresh Mathivanan (6) , Prabhu Mathiyalagan (26) , Tamas Matusek (35, 34) , Gloria Milani (2) , Marta Monguio-Tortajada (36) , Liselot M. Mus (2) , Dillon C. Muth (22) , Andrea Nemeth (37) , Esther N. M. Nolte-'T Hoen (7) , Lorraine O'Driscoll (38) , Roberta Palmulli (33, 34, 28) , Michael W. Pfaffl (11) , Bjarke Primdal-Bengtson (27, 28, 29) , Erminia Romano (3) , Quentin Rousseau (1) , Susmita Sahoo (26) , Natalia Sampaio (39) , Monisha Samuel (6) , Benjamin Scicluna (6) , Bieke Soen (4, 5) , Anneleen Steels (7) , Johannes V. Swinnen (40) , Maarit Takatalo (41, 42) , Safia Thaminy (43) , Clotilde Thery (27, 28, 29) , Joeri Tulkens (1) , Isabel van Audenhove (7) , Susanne van Der Grein (7) , Alan van Goethem (2) , Martijn J. van Herwijnen (7) , Guillaume van Niel (33, 34, 28) , Nadine van Roy (2) , Alexander R. van Vliet (3) , Niels Vandamme (4, 5) , Suzanne Vanhauwaert (2) , Glenn Vergauwen (1) , Frederik Verweij (33, 34, 28) , Annelynn Wallaert (2) , Marca Wauben (7) , Kenneth W. Witwer (22) , Marijke I. Zonneveld (7) , Olivier de Wever (1) , Jo Vandesompele (44) , An Hendrix (1)
1 Laboratory of Experimental Cancer Research, Department of Radiation Oncology and Experimental Cancer Research, Cancer Research Institute Ghent (CRIG)
2 Center for Medical Genetics, Cancer Research Institute Ghent (CRIG), Bioinformatics Institute Ghent (BIG)
3 Cell Death Research & Therapy (CDRT) Lab
4 Molecular and Cellular Oncology Lab, Inflammation Research Center, VIB
5 Department of Biomedical Molecular Biology, Cancer Research Institute Ghent (CRIG)
6 Department of Biochemistry and Genetics, La Trobe Institute for Molecular Science
7 Instituto de Investigacion Sanitaria del Hospital de la Princesa
8 Department of Biochemistry, Faculty of Medicine and Health Sciences
9 Department of Biochemistry and Cell Biology, Faculty of Veterinary Medicine
10 Institute for Transfusion Medicine
11 Animal Physiology and Immunology, School of Life Sciences
12 Laboratory of Cytometry, Department of Internal Medicine
13 Department of Biochemistry
14 Institute of Clinical Molecular Biology
15 Faculty of Sciences, Division of Biochemistry, Chemistry Department
16 PhAN - Physiopathologie des Adaptations Nutritionnelles
17 Department of Biochemistry, Microbiology and Immunology
18 Inflammation Division
19 Department of Medical Biology
20 Partner site Munich
21 Research Unit Gene Vectors
22 Department of Molecular and Comparative Pathobiology and Department of Neurology
23 FMTS - Fédération de Médecine Translationelle de Strasbourg
24 Centre de recherche du médicament Medalis - Drug Discovery Center [LabEx]
25 MNT3 - Equipe "The Microenvironmental Niche in Tumorigenesis and Targeted Therapy"
26 Cardiovascular Research Center
27 U932 - Immunité et cancer
28 PSL - Université Paris sciences et lettres
29 INSERM - Institut National de la Santé et de la Recherche Médicale
30 Department of Thoracic and Cardiovascular Surgery
31 Institute of Human Genetics
32 German Center for Neurodegenerative Diseases
33 CDC - Compartimentation et dynamique cellulaires
34 CNRS - Centre National de la Recherche Scientifique
35 IBV - Institut de Biologie Valrose
36 REMAR-IVECAT Group
37 Department of Genetics, Cell- and Immunobiology
38 School of Pharmacy and Pharmaceutical Sciences and Trinity Biomedical Sciences Institute
39 Population Health and Immunity Division
40 Laboratory of Lipid Metabolism and Cancer, Department of Oncology, LKI - Leuven Cancer Institute
41 Faculty of Biological and Environmental Sciences [Helsinki]
42 Division of Molecular and Cellular Medicine
43 National Cancer Center
44 Center for Medical Genetics, Cancer Research Institute Ghent (CRIG), Bioinformatics Institute Ghent (BIG)

Résumé

We argue that the field of extracellular vesicle (EV) biology needs more transparent reporting to facilitate interpretation and replication of experiments. To achieve this, we describe EV-TRACK, a crowdsourcing knowledgebase (http://evtrack.org) that centralizes EV biology and methodology with the goal of stimulating authors, reviewers, editors and funders to put experimental guidelines into practice.
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Dates et versions

hal-01607037 , version 1 (02-10-2017)

Identifiants

Citer

Jan van Deun, Pieter Mestdagh, Patrizia Agostinis, Ozden Akay, Sushma Anand, et al.. EV-TRACK: transparent reporting and centralizing knowledge in extracellular vesicle research. Nature Methods, 2017, 14 (3), pp.228-232. ⟨10.1038/nmeth.4185⟩. ⟨hal-01607037⟩
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