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Model of copepod growth and development: moulting and mortality in relation to physiological processes during an individual moult cycle

 F Carlotti , P. Nival
Marine Ecology Progress Series, 1992, 84, pp.219-233
Journal articles hal-02008745v1
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Population dynamics model of Euterpina acutifrons (Copepoda. Harpacticoida) coupling individual growth and larval development

 Francois Carlotti , A. Sciandra
Marine Ecology Progress Series, 1989, 56, pp.225 - 242. ⟨10.3354/meps056225⟩
Journal articles hal-01894078v1
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Lateral Temporal Lobe: An Early Imaging Marker of the Presymptomatic GRN Disease?

 Paola Caroppo , Marie-Odile Habert , Stanley Durrleman , Aurélie Funkiewiez , Vincent Perlbarg et al.
Journal of Alzheimer's Disease, 2015, 47 (3), pp.751-9. ⟨10.3233/JAD-150270⟩
Journal articles hal-01220380v1

A comparison of global estimates of marine primary production from ocean color

 Mary-Elena Carr , Marjorie A. M. Friedrichs , Marjorie Schmeltz , Maki Noguchi Aita , David Antoine et al.
Deep-Sea Research Part Ii-Topical Studies in Oceanography, 2006, 53 (5-7), pp.741-770. ⟨10.1016/j.dsr2.2006.01.028⟩
Journal articles hal-03494195v1

COMPLEX REPRODUCTIVE-CYCLE IN EUCHEILOTA-PARADOXICA (HYDROZOA, LEPTOMEDUSAE) - MEDUSAE, POLYPS AND FRUSTULES PRODUCED FROM MEDUSA STAGE

 Danièle Carre , Claude Carré
Marine Biology, 1990, 104 (2), pp.303--310
Journal articles hal-03313435v1
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Modelling, analysis and control for systems biology : application to bacterial growth models

 Alfonso Carta
Automatic Control Engineering. Universite de Nice Sophia-Antipolis (UNS), 2014. English. ⟨NNT : ⟩
Theses tel-01094091v1
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Continuous-switch piecewise quadratic models of biological networks: Application to bacterial growth

 Alfonso Carta , Madalena Chaves , Jean-Luc Gouzé
Automatica, 2015, 61, pp.164-172. ⟨10.1016/j.automatica.2015.07.031⟩
Journal articles hal-01231368v1

A class of Switched Piecewise Quadratic Systems for coupling gene expression with growth rate in bacteria

 Alfonso Carta , Madalena Chaves , Jean-Luc Gouzé
9th IFAC Symposium Nonlinear Control Systems (NOLCOS'13), Sep 2013, Toulouse, France. pp.271-276, ⟨10.3182/20130904-3-FR-2041.00140⟩
Conference papers hal-00850372v1
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Modelling, analysis and control for systems biology : application to bacterial growth models

 Alfonso Carta
Other. Université Nice Sophia Antipolis, 2014. English. ⟨NNT : 2014NICE4024⟩
Theses tel-01094091v2
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A simple model to control growth rate of synthetic E. coli during the exponential phase: model analysis and parameter estimation

 Alfonso Carta , Madalena Chaves , Jean-Luc Gouzé
David Gilbert and Monika Heiner. Computational Methods in Systems Biology, 7605, Springer, pp.107-126, 2012, Lecture Notes in Computer Science, ⟨10.1007/978-3-642-33636-2_8⟩
Book sections hal-00848400v1

State estimation for gene networks with intrinsic and extrinsic noise: a case study on E.coli arabinose uptake dynamics

 Alfonso Carta , Eugenio Cinquemani
ECC13 - European Control Conference - 2013, Jul 2013, Zurich, Switzerland
Conference papers hal-00818902v1

GEMCO Deliverable D2T1: Analysis and reduction of a model of the gene expression machinery in E.coli

 Luis Casaccia , Wassim Abou-Jaoudé , Jean-Luc Gouzé
[Research Report] 2012
Reports hal-00848402v1
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Principal Process Analysis and reduction of biological models with order of magnitude

 Stefano Casagranda , Jean-Luc Gouzé
IFAC World Congress, International Federation of Automatic Control (IFAC). AUT., Jul 2017, Toulouse, France. 15968 p., ⟨10.1016/j.ifacol.2017.08.2241⟩
Conference papers hal-01529448v1

Model simplification and process analysis of biological models

 Stefano Casagranda , Delphine Ropers , Jean-Luc Gouzé
The 5th International Symposium on Positive Systems (POSTA), Sep 2016, Rome, Italy
Conference papers hal-01412049v1
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Model reduction and process analysis of biological models

 Stefano Casagranda , Delphine Ropers , Jean-Luc Gouzé
2015 23th Mediterranean Conference on Control and Automation (MED), Jun 2015, Torremolinos, Spain. ⟨10.1109/MED.2015.7158908⟩
Conference papers hal-01239356v1
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Modeling, analysis and reduction of biological systems

 Stefano Casagranda
Other. Université Côte d'Azur, 2017. English. ⟨NNT : 2017AZUR4049⟩
Theses tel-02169197v1
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Piecewise-linear Models of Genetic Regulatory Networks: Equilibria and their Stability

 Richard Casey , Hidde de Jong , Jean-Luc Gouzé
[Research Report] RR-5353, INRIA. 2004
Reports inria-00071250v1

Evolutionary insights from semi-discrete plant epidemic models

 Magda Castel , Frédéric Marie Hamelin , Sylvain Poggi , Didier Andrivon , Ludovic Mailleret et al.
European Conference on Mathematical and Theoretical Biology, 2011, Krakow, Poland
Conference papers hal-00848403v1

Allee Effects and the Evolution of Polymorphism in Cyclic Parthenogens

 Magda Castel , Ludovic Mailleret , Didier Andrivon , Virginie Ravigné , Frédéric Marie Hamelin et al.
The American Naturalist, 2014, 183 (3), pp.E75-E88. ⟨10.1086/674828⟩
Journal articles hal-00854466v1

Allee effects and the evolution of polymorphism in cyclical parthenogens.

 Magda Castel , Ludovic Mailleret , Didier Andrivon , Virginie Ravigné , Frédéric Marie Hamelin et al.
Conférences Jacques Monod: Avancées récentes sur l'évolution du sexe et des systèmes génétiques, 2013, Roscoff, France
Conference papers hal-00853199v1

Allee effects and the evolution of polymorphism in cyclical parthenogens.

 Magda Castel , Ludovic Mailleret , Didier Andrivon , Virginie Ravigné
NIMBioS workshop on vectored plant viruses, 2014, Knoxville, United States
Conference papers hal-01101288v1

On the evolutionary ecology of cyclically asexual plant parasites

 Magda Castel , Ludovic Mailleret , Virginie Ravigné , Frédéric Marie Hamelin
Models in Population Dynamics and Ecology (MPDE12), 2012, Santa Maria, Brazil
Conference papers hal-00848404v1

PARACENTROTUS-LIVIDUS (LAMARCK) IN CULTURE (LARVAL AND BENTHIC PHASES) - PARAMETERS OF GROWTH OBSERVED DURING 2 YEARS FOLLOWING METAMORPHOSIS

 Christianne Cellario , Lucienne Fenaux
Aquaculture, 1990, 84 (2), pp.173--188
Journal articles hal-03313440v1

Effect of sunlight on prokaryotic organic carbon uptake and dynamics of pigments relevant to photoheterotrophy in the Adriatic Sea

 Mauro Celussi , Alessandra A. Gallina , Josephine Ras , Michele Giani , Paola del Negro et al.
Aquatic Microbial Ecology, 2015, 74 (3), pp.235-249. ⟨10.3354/ame01738⟩
Journal articles hal-03502746v1
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Probabilistic Observers for a Class of Uncertain Biological Processes

 Benoit Chachuat , Olivier Bernard
International Journal of Robust and Nonlinear Control, 2005, 16, pp.157-171
Journal articles inria-00122551v1
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Natural enemy-mediated indirect interactions among prey species: potential for enhancing biocontrol services in agroecosystems

 Anaïs Chailleux , Emily K Mohl , Mickaël Teixeira Alves , Gerben J Messelink , Nicolas Desneux et al.
Pest Management Science, 2014, 70 (12), pp.1769 - 1779. ⟨10.1002/ps.3916⟩
Journal articles hal-01571388v1
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Sensitivity of the retrieval of the inherent optical properties of marine particles in coastal waters to the directional variations and the polarization of the reflectance

 Malik Chami , Michael Defoin Platel
JOURNAL OF GEOPHYSICAL RESEARCH-OCEANS, 2007, 112 (C5), ⟨10.1029/2006JC003758⟩
Journal articles istex hal-03504946v1
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Importance of the polarization in the retrieval of oceanic constituents from the remote sensing reflectance

 Malik Chami
JOURNAL OF GEOPHYSICAL RESEARCH-OCEANS, 2007, 112 (C5), ⟨10.1029/2006JC003843⟩
Journal articles hal-03504947v1
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OSOAA: a vector radiative transfer model of coupled atmosphere-ocean system for a rough sea surface application to the estimates of the directional variations of the water leaving reflectance to better process multi-angular satellite sensors data over the ocean

 Malik Chami , Bruno Lafrance , Bertrand Fougnie , Jacek Chowdhary , Tristan Harmel et al.
Optics Express, 2015, 23 (21), pp.27829-27852. ⟨10.1364/OE.23.027829⟩
Journal articles hal-01272796v1

Analysis of the underwater image degradation using radiative transfer modeling. Application to submarine image visibility

 Malik Chami , K. Ebert , A.-G. Allais , M. Bouhier , T. Edmond et al.
Ocean Optics (2011), 2011, Anchorage (Alaska), United States
Conference poster hal-01688627v1

Influence of the angular shape of the volume-scattering function and multiple scattering on remote sensing reflectance

 Malik Chami , David Mckee , Edouard Leymarie , Gueorgui Khomenko
Applied Optics, 2006, 45 (36), pp.9210-9220. ⟨10.1364/AO.45.009210⟩
Journal articles hal-03494169v1

POLVSM (Polarized Volume Scattering Meter) instrument: an innovative device to measure the directional and polarized scattering properties of hydrosols

 Malik Chami , Alexandre Thirouard , Tristan Harmel
Optics Express, 2014, 22 (21), pp.26403-26428. ⟨10.1364/OE.22.026403⟩
Journal articles hal-03502758v1

Spectral variation of the volume scattering function measured over the full range of scattering angles in a coastal environment

 Malik Chami , Eugeny B. Shybanov , Gueorgui A. Khomenko , Michael E. -G. Lee , Oleg V. Martynov et al.
Applied Optics, 2006, 45 (15), pp.3605-3619. ⟨10.1364/AO.45.003605⟩
Journal articles hal-03494187v1

Determination of biogeochemical properties of marine particles using above water measurements of the degree of polarization at the Brewster angle

 Malik Chami , David Mckee
Optics Express, 2007, 15 (15), pp.9494-9509. ⟨10.1364/OE.15.009494⟩
Journal articles hal-03504942v1

Completion of a Sparse GLIDER Database Using Multi-iterative Self-Organizing Maps (ITCOMP SOM)

 Anastase Alexandre Charantonis , Pierre Testor , Laurent Mortier , Fabrizio d'Ortenzio , Sylvie Thiria et al.
Procedia Computer Science, 2015, 51, pp.2198-2206. ⟨10.1016/j.procs.2015.05.496⟩
Journal articles hal-01234178v1
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Probabilistic approach for predicting periodic orbits in piecewise affine differential models

 Madalena Chaves , Etienne Farcot , Jean-Luc Gouzé
Bulletin of Mathematical Biology, 2013, 75 (6), pp.967-987. ⟨10.1007/s11538-012-9773-6⟩
Journal articles hal-00828847v1
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Exact control of genetic networks in a qualitative framework: the bistable switch example

 Madalena Chaves , Jean-Luc Gouzé
[Research Report] RR-7359, INRIA. 2010, pp.22
Reports inria-00507040v1

Qualitative Control of a Bistable Genetic Network

 Madalena Chaves , Jean-Luc Gouzé
European Conference on Mathematical and Theoretical Biology, 2011, Krakow, Poland
Conference papers hal-00848405v1
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Comparison between Boolean and piecewise affine differential models for genetic networks

 Madalena Chaves , Laurent Tournier , Jean-Luc Gouzé
[Research Report] RR-7070, INRIA. 2009, pp.23
Reports inria-00426414v1
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Attractor computation using interconnected Boolean networks: testing growth rate models in E. Coli

 Madalena Chaves , Alfonso Carta
Theoretical Computer Science, 2014, pp.17. ⟨10.1016/j.tcs.2014.06.021⟩
Journal articles hal-01095196v1
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2D piecewise affine models approximate real continuous dynamics up to invariant sets

 Madalena Chaves , Jean-Luc Gouzé
NOLCOS 2016 - 10th IFAC Symposium on Nonlinear Control Systems, Aug 2016, Monterey, United States
Conference papers hal-01410972v1
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Transition probabilities for piecewise affine models of genetic networks

 Madalena Chaves , Etienne Farcot , Jean-Luc Gouzé
Proc. Int. Symp. Mathematical Theory of Networks and Systems (MTNS 10), Budapest, Hungary, Jul. 2010., 2010, Budapest, Hungary
Conference papers hal-00831793v1
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Piecewise affine models of regulatory genetic networks: review and probabilistic interpretation

 Madalena Chaves , Jean-Luc Gouzé
Lévine, Jean and Müllhaupt, Philippe. Advances in the Theory of Control, Signals and Systems, with Physical Modelling, 407, Springer, pp.241-253, 2010, Lecture Notes in Control and Information Sciences, ⟨10.1007/978-3-642-16135-3_20⟩
Book sections hal-00847287v1

Qualitative control of genetic networks: the bistable switch example

 Madalena Chaves , Jean-Luc Gouzé
8th IFAC Symposium on Nonlinear Control Systems (NOLCOS 2010), 2010, Bologna, Italy. pp.338-343, ⟨10.3182/20100901-3-IT-2016.00166⟩
Conference papers hal-00847280v1
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Exact control of genetic networks in a qualitative framework: the bistable switch example

 Madalena Chaves , Jean-Luc Gouzé
Automatica, 2011, 47 (6), pp.1105-1112. ⟨10.1016/j.automatica.2011.01.071⟩
Journal articles hal-00848406v1

Predictive analysis for biological regulatory systems – combining discrete and continuous formalisms

 Madalena Chaves
Symposium on Mathematical Theory of Networks and Systems (MTNS'14), Jul 2014, Groningen, Netherlands
Conference papers hal-01096263v1
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Predictive analysis of dynamical systems: combining discrete and continuous formalisms

 Madalena Chaves
Dynamical Systems [math.DS]. Université Nice Sophia Antipolis, 2013
Habilitation à diriger des recherches tel-00908927v1

Hybrid models for the interconnection of circadian and genetic cycles in cyanobacteria

 Madalena Chaves , Miguel Preto
21st International Symposium on Mathematical Theory of Networks and Systems, Jul 2014, Groningen, Netherlands. pp.4
Conference papers hal-01095211v1
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Predicting the asymptotic dynamics of large biological networks by interconnections of Boolean modules

 Madalena Chaves , Laurent Tournier
50th IEEE Conference on Decision and Control and European Control Conference, 2011, Orlando, Florida, United States. pp.3026-3031, ⟨10.1109/CDC.2011.6160454⟩
Conference papers hal-00848407v1

Hybrid mathematical formalism for analysis of biological regulatory networks

 Madalena Chaves
IEEE International Meeting on Analysis and Applications of Nonsmooth Systems, Sep 2014, COMO, Italy
Conference papers hal-01096270v1
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